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rVarBase
SNP Report
Basic Infomation
Name
rs2232944  
dbSNP
Location
chr:11,62009135
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 8)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11230920
1.00[YRI][hapmap]
rs12270597
0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1729387
0.83[EUR][1000 genomes]
rs17636205
1.00[YRI][hapmap]
rs1894159
0.80[AMR][1000 genomes]
rs2232949
0.92[CEU][hapmap];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3018377
1.00[CHB][hapmap]
rs72917336
0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
SCGB1D2
Proximal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)