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rVarBase
SNP Report
Basic Infomation
Name
rs2215552  
dbSNP
Location
chr:7,116913211
Allele
T/A
LD-proxy of rSNPs(r
2
>0.8) (count: 11)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10226248
0.92[ASN][1000 genomes]
rs12706145
0.80[ASN][1000 genomes]
rs12706147
0.80[ASN][1000 genomes]
rs13227482
0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs4727845
0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs4730773
0.80[ASN][1000 genomes]
rs4730775
0.83[JPT][hapmap];0.87[ASN][1000 genomes]
rs6950776
0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs6951125
0.83[JPT][hapmap];0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs9691008
0.80[ASN][1000 genomes]
rs9692365
0.80[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
TES
Distal transcriptional regulation
ST7
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)