SNP Report

Basic Infomation

Name	rs2174281 dbSNP
Location	chr:6,90987872
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 35)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11752685	0.93[ASN][1000 genomes]
rs11757155	1.00[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs12204886	0.85[ASW][hapmap];0.89[LWK][hapmap];0.91[MKK][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs12212193	0.80[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.81[YRI][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1604830	0.93[ASN][1000 genomes]
rs1604831	0.93[ASN][1000 genomes]
rs17513415	0.93[ASN][1000 genomes]
rs17513531	0.82[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs1847472	1.00[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs2089126	0.93[ASN][1000 genomes]
rs2134814	0.96[ASN][1000 genomes]
rs2325291	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs2325292	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs2875584	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs4142967	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs45553631	0.93[ASN][1000 genomes]
rs55771973	0.93[ASN][1000 genomes]
rs55881869	0.93[ASN][1000 genomes]
rs55885254	0.93[ASN][1000 genomes]
rs56106243	0.93[ASN][1000 genomes]
rs58453446	0.93[ASN][1000 genomes]
rs58521088	0.93[ASN][1000 genomes]
rs62408222	0.93[ASN][1000 genomes]
rs62408224	0.93[ASN][1000 genomes]
rs62408227	0.93[ASN][1000 genomes]
rs62408233	0.93[ASN][1000 genomes]
rs62408236	0.93[ASN][1000 genomes]
rs62408237	0.93[ASN][1000 genomes]
rs6454805	0.93[ASN][1000 genomes]
rs6899623	0.93[ASN][1000 genomes]
rs72925996	0.93[ASN][1000 genomes]
rs7756574	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.86[AFR][1000 genomes]
rs905670	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs905671	0.93[ASN][1000 genomes]
rs943689	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
BACH2	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)