SNP Report

Basic Infomation

Name	rs2041740 dbSNP
Location	chr:2,102989734
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 64)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10165460	0.88[ASN][1000 genomes]
rs10190555	0.93[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs10197284	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs10197881	0.89[ASN][1000 genomes]
rs10469840	0.89[ASN][1000 genomes]
rs11123931	0.88[ASN][1000 genomes]
rs11465583	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs11677107	0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs11694658	0.90[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs12712145	0.92[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1420106	0.92[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs1465321	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs1468791	0.89[ASN][1000 genomes]
rs1558627	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs1558650	0.82[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1558652	0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1568681	0.92[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1573895	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs1807782	0.92[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs2001461	0.92[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2041756	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2058622	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs2058623	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs2058658	0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2058660	0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2075185	0.92[ASN][1000 genomes]
rs2110734	0.86[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2110735	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2160232	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2241117	0.91[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs2270297	0.95[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs2272128	0.92[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs3755267	0.92[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs3755268	0.92[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs3755274	0.92[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs3771170	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs3817465	0.92[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs3860444	0.92[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs4851007	0.91[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs4851008	0.92[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4851009	0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4851575	0.91[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs4851584	0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4851586	0.92[ASN][1000 genomes]
rs6543134	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6543137	0.92[ASN][1000 genomes]
rs6708413	0.92[ASN][1000 genomes]
rs6713618	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6716784	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6727306	0.84[AMR][1000 genomes]
rs6729638	0.92[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs6731154	0.91[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs6733346	0.92[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6734736	0.92[ASN][1000 genomes]
rs6737668	0.87[ASN][1000 genomes]
rs6746271	0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6750020	0.91[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs6753717	0.95[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs6755786	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7559479	0.92[ASN][1000 genomes]
rs7597819	0.88[ASN][1000 genomes]
rs7603250	0.92[ASN][1000 genomes]
rs917997	0.92[ASN][1000 genomes]
rs990171	0.89[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
IL18R1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)