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rVarBase
SNP Report
Basic Infomation
Name
rs1939764  
dbSNP
Location
chr:11,62934102
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 6)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10732886
1.00[YRI][hapmap]
rs1152240
1.00[LWK][hapmap]
rs1193719
1.00[LWK][hapmap]
rs1525072
1.00[YRI][hapmap]
rs1939765
1.00[AFR][1000 genomes]
rs7926160
1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
SLC22A25
Proximal transcriptional regulation
SLC22A10
RNA binding protein mediated regulation
SLC22A25
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)