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rVarBase
SNP Report
Basic Infomation
Name
rs1806245  
dbSNP
Location
chr:17,5308555
Allele
T/C
LD-proxy of rSNPs(r
2
>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11652692
1.00[CHB][hapmap]
rs11653654
1.00[CHB][hapmap]
rs11654668
1.00[CHB][hapmap]
rs12942931
1.00[CHB][hapmap]
rs16954715
1.00[CHB][hapmap]
rs1805448
1.00[CHB][hapmap]
rs1805452
1.00[CHB][hapmap]
rs1805456
1.00[CHB][hapmap]
rs1805457
1.00[CHB][hapmap]
rs3026156
1.00[CHB][hapmap]
rs8066805
1.00[CHB][hapmap]
rs8068792
1.00[CHB][hapmap]
rs8077225
1.00[CHB][hapmap]
rs8081387
1.00[CHB][hapmap]
rSNP related genes
Symbol
Regulation type
NUP88
Distal transcriptional regulation
RPAIN
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)