SNP Report
Basic Infomation
| Name | rs1805140 dbSNP |
|---|---|
| Location | chr:11,61724918 |
| Allele | C/A |
LD-proxy of rSNPs(r2>0.8) (count: 113)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10750961 | 1.00[EUR][1000 genomes] |
| rs10750962 | 1.00[EUR][1000 genomes] |
| rs10792323 | 1.00[EUR][1000 genomes] |
| rs11230861 | 1.00[EUR][1000 genomes] |
| rs12280359 | 1.00[EUR][1000 genomes] |
| rs12290643 | 1.00[EUR][1000 genomes] |
| rs12292968 | 1.00[EUR][1000 genomes] |
| rs1380568 | 1.00[EUR][1000 genomes] |
| rs1612738 | 1.00[EUR][1000 genomes] |
| rs1612739 | 1.00[EUR][1000 genomes] |
| rs1615317 | 1.00[EUR][1000 genomes] |
| rs1616917 | 1.00[EUR][1000 genomes] |
| rs1617696 | 1.00[EUR][1000 genomes] |
| rs1630142 | 1.00[EUR][1000 genomes] |
| rs1630740 | 1.00[EUR][1000 genomes] |
| rs1630761 | 1.00[EUR][1000 genomes] |
| rs1675066 | 1.00[EUR][1000 genomes] |
| rs1675069 | 1.00[EUR][1000 genomes] |
| rs1675070 | 1.00[EUR][1000 genomes] |
| rs1675071 | 1.00[EUR][1000 genomes] |
| rs1675073 | 1.00[EUR][1000 genomes] |
| rs1675074 | 1.00[EUR][1000 genomes] |
| rs1675075 | 1.00[EUR][1000 genomes] |
| rs1675076 | 1.00[EUR][1000 genomes] |
| rs1675110 | 1.00[EUR][1000 genomes] |
| rs1675111 | 1.00[EUR][1000 genomes] |
| rs1675112 | 1.00[EUR][1000 genomes] |
| rs1675114 | 1.00[EUR][1000 genomes] |
| rs1675115 | 1.00[EUR][1000 genomes] |
| rs1675117 | 1.00[EUR][1000 genomes] |
| rs1675118 | 1.00[EUR][1000 genomes] |
| rs1675119 | 1.00[EUR][1000 genomes] |
| rs1675120 | 1.00[EUR][1000 genomes] |
| rs17156469 | 1.00[EUR][1000 genomes] |
| rs17156506 | 1.00[EUR][1000 genomes] |
| rs1792880 | 1.00[EUR][1000 genomes] |
| rs1792881 | 1.00[EUR][1000 genomes] |
| rs1792883 | 1.00[EUR][1000 genomes] |
| rs1792884 | 1.00[EUR][1000 genomes] |
| rs1792885 | 1.00[EUR][1000 genomes] |
| rs1792887 | 1.00[EUR][1000 genomes] |
| rs1792889 | 1.00[EUR][1000 genomes] |
| rs1792890 | 1.00[EUR][1000 genomes] |
| rs1792891 | 1.00[EUR][1000 genomes] |
| rs1792892 | 1.00[EUR][1000 genomes] |
| rs1792894 | 1.00[EUR][1000 genomes] |
| rs1792895 | 1.00[EUR][1000 genomes] |
| rs1792896 | 1.00[EUR][1000 genomes] |
| rs1792921 | 1.00[EUR][1000 genomes] |
| rs1792923 | 1.00[EUR][1000 genomes] |
| rs1792924 | 1.00[EUR][1000 genomes] |
| rs1792925 | 1.00[EUR][1000 genomes] |
| rs1792926 | 1.00[EUR][1000 genomes] |
| rs1792927 | 1.00[EUR][1000 genomes] |
| rs1792928 | 1.00[EUR][1000 genomes] |
| rs1792929 | 1.00[EUR][1000 genomes] |
| rs1792931 | 1.00[EUR][1000 genomes] |
| rs1792947 | 1.00[EUR][1000 genomes] |
| rs1792953 | 1.00[EUR][1000 genomes] |
| rs185451 | 1.00[EUR][1000 genomes] |
| rs2125849 | 1.00[EUR][1000 genomes] |
| rs2244616 | 1.00[EUR][1000 genomes] |
| rs2246572 | 1.00[EUR][1000 genomes] |
| rs2254470 | 1.00[EUR][1000 genomes] |
| rs2458316 | 1.00[EUR][1000 genomes] |
| rs259868 | 1.00[EUR][1000 genomes] |
| rs259870 | 1.00[EUR][1000 genomes] |
| rs259881 | 1.00[EUR][1000 genomes] |
| rs259882 | 1.00[EUR][1000 genomes] |
| rs2611758 | 1.00[EUR][1000 genomes] |
| rs2611766 | 1.00[EUR][1000 genomes] |
| rs2611767 | 1.00[EUR][1000 genomes] |
| rs2668896 | 1.00[EUR][1000 genomes] |
| rs2926518 | 1.00[EUR][1000 genomes] |
| rs2926519 | 1.00[EUR][1000 genomes] |
| rs2926523 | 1.00[EUR][1000 genomes] |
| rs2955682 | 1.00[EUR][1000 genomes] |
| rs2955685 | 1.00[EUR][1000 genomes] |
| rs2958341 | 1.00[EUR][1000 genomes] |
| rs3018375 | 1.00[EUR][1000 genomes] |
| rs3018376 | 1.00[EUR][1000 genomes] |
| rs3018377 | 1.00[EUR][1000 genomes] |
| rs368878 | 1.00[EUR][1000 genomes] |
| rs371297 | 1.00[EUR][1000 genomes] |
| rs380361 | 1.00[EUR][1000 genomes] |
| rs3972399 | 1.00[EUR][1000 genomes] |
| rs401726 | 1.00[EUR][1000 genomes] |
| rs409771 | 1.00[EUR][1000 genomes] |
| rs410136 | 1.00[EUR][1000 genomes] |
| rs412422 | 1.00[EUR][1000 genomes] |
| rs413484 | 1.00[EUR][1000 genomes] |
| rs415627 | 1.00[EUR][1000 genomes] |
| rs426843 | 1.00[EUR][1000 genomes] |
| rs437059 | 1.00[EUR][1000 genomes] |
| rs437600 | 1.00[EUR][1000 genomes] |
| rs446667 | 1.00[EUR][1000 genomes] |
| rs450709 | 1.00[EUR][1000 genomes] |
| rs4963280 | 1.00[EUR][1000 genomes] |
| rs58048250 | 1.00[EUR][1000 genomes] |
| rs58473786 | 1.00[EUR][1000 genomes] |
| rs61413106 | 1.00[EUR][1000 genomes] |
| rs654226 | 1.00[EUR][1000 genomes] |
| rs7107586 | 1.00[EUR][1000 genomes] |
| rs7116842 | 1.00[EUR][1000 genomes] |
| rs7119878 | 1.00[EUR][1000 genomes] |
| rs7125519 | 1.00[EUR][1000 genomes] |
| rs73491300 | 1.00[EUR][1000 genomes] |
| rs7948784 | 1.00[EUR][1000 genomes] |
| rs7949588 | 1.00[EUR][1000 genomes] |
| rs898379 | 1.00[EUR][1000 genomes] |
| rs898381 | 1.00[EUR][1000 genomes] |
| rs898382 | 1.00[EUR][1000 genomes] |
| rs907637 | 1.00[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| FEN1 | Distal transcriptional regulation |
| FADS2 | Distal transcriptional regulation |
| BEST1 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014