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rVarBase
SNP Report
Basic Infomation
Name
rs1790602  
dbSNP
Location
chr:18,67513581
Allele
G/C
LD-proxy of rSNPs(r
2
>0.8) (count: 8)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1469857
0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17081746
0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17800362
1.00[CEU][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1788230
0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1790942
0.84[EUR][1000 genomes]
rs4891377
0.84[EUR][1000 genomes]
rs7228448
0.85[EUR][1000 genomes]
rs72481820
0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
DOK6
Proximal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)