SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs17249437	0.95[CEU][hapmap];0.85[CHB][hapmap];0.95[JPT][hapmap]
rs1885042	0.95[CEU][hapmap];0.90[CHB][hapmap];0.95[JPT][hapmap]
rs1997896	0.80[JPT][hapmap]
rs3742878	0.93[CEU][hapmap]
rs3759757	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6573788	0.95[CEU][hapmap];0.89[CHB][hapmap];0.95[JPT][hapmap]
rs7151920	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs8012815	0.95[CEU][hapmap]
rs8013117	1.00[CEU][hapmap];0.89[CHB][hapmap];0.95[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
ENSG00000259502	Proximal transcriptional regulation
ENSG00000259648	Distal transcriptional regulation
VTI1B	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)