SNP Report

Basic Infomation

Name	rs1776209 dbSNP
Location	chr:10,93810872
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 33)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10786029	1.00[YRI][hapmap]
rs11186755	0.86[CHB][hapmap];0.86[JPT][hapmap]
rs11186768	0.86[CHB][hapmap];0.81[CHD][hapmap];0.91[GIH][hapmap];0.86[JPT][hapmap]
rs1137825	0.85[CHB][hapmap];0.86[JPT][hapmap]
rs11598321	0.86[CHB][hapmap];0.81[CHD][hapmap];0.89[GIH][hapmap];0.86[JPT][hapmap]
rs1229578	1.00[YRI][hapmap]
rs12413858	0.88[JPT][hapmap]
rs12415793	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs12416560	0.86[CHB][hapmap];0.91[GIH][hapmap];0.86[JPT][hapmap]
rs12571564	0.86[CHB][hapmap];0.81[CHD][hapmap];0.91[GIH][hapmap];0.86[JPT][hapmap]
rs12763600	0.86[CHB][hapmap];0.81[CHD][hapmap];0.91[GIH][hapmap];0.86[JPT][hapmap]
rs12774665	0.85[CHB][hapmap];0.90[JPT][hapmap]
rs1340421	0.86[CHB][hapmap];0.81[CHD][hapmap];0.91[GIH][hapmap];0.86[JPT][hapmap]
rs1437	0.86[CHB][hapmap];0.91[GIH][hapmap];0.86[JPT][hapmap];0.80[ASN][1000 genomes]
rs1474051	0.86[CHB][hapmap];0.82[JPT][hapmap]
rs1622656	1.00[YRI][hapmap]
rs2676817	0.86[CHB][hapmap];0.86[JPT][hapmap]
rs2676819	0.86[CHB][hapmap];0.81[CHD][hapmap];0.91[GIH][hapmap];0.86[JPT][hapmap]
rs2676820	0.86[CHB][hapmap];0.86[JPT][hapmap]
rs2676822	0.85[CHB][hapmap];0.86[JPT][hapmap]
rs2676825	0.86[CHB][hapmap];0.81[CHD][hapmap];0.89[GIH][hapmap];0.86[JPT][hapmap]
rs2792022	0.86[CHB][hapmap];0.81[CHD][hapmap];0.86[JPT][hapmap]
rs2797639	0.86[CHB][hapmap];0.86[JPT][hapmap]
rs3814640	0.85[CHB][hapmap];0.89[GIH][hapmap];0.86[JPT][hapmap]
rs4375360	0.86[CHB][hapmap];0.86[JPT][hapmap]
rs4933224	0.86[CHB][hapmap];0.81[CHD][hapmap];0.91[GIH][hapmap];0.86[JPT][hapmap]
rs4933705	0.85[CHB][hapmap];0.85[JPT][hapmap]
rs4933707	0.86[CHB][hapmap];0.86[JPT][hapmap]
rs7904126	0.86[CHB][hapmap];0.86[JPT][hapmap]
rs7920520	1.00[YRI][hapmap]
rs833367	0.86[CHB][hapmap];0.81[CHD][hapmap];0.91[GIH][hapmap];0.86[JPT][hapmap]
rs833372	0.86[CHB][hapmap];0.86[JPT][hapmap]
rs833384	0.81[CHB][hapmap];0.81[CHD][hapmap];0.91[GIH][hapmap];0.86[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
CPEB3	Proximal transcriptional regulation
CPEB3	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)