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rVarBase
SNP Report
Basic Infomation
Name
rs17120936  
dbSNP
Location
chr:12,41119690
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 8)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11836043
1.00[CHB][hapmap];0.83[ASN][1000 genomes]
rs1596509
1.00[JPT][hapmap]
rs1596539
1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs17128643
1.00[AMR][1000 genomes]
rs6581931
0.85[CHD][hapmap];1.00[JPT][hapmap]
rs7301307
1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs7965788
0.83[ASN][1000 genomes]
rs935230
1.00[JPT][hapmap]
rSNP related genes
Symbol
Regulation type
ENSG00000257680
Proximal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)