SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11661553	0.91[CHB][hapmap]
rs12455361	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12956324	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1469858	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1788097	0.95[CHB][hapmap];0.83[ASN][1000 genomes]
rs1788098	0.95[CHB][hapmap];0.82[ASN][1000 genomes]
rs1790966	0.80[EUR][1000 genomes]
rs2469434	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34794968	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4891376	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs763362	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CD226	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)