SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1156990	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1877661	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2175826	0.83[AMR][1000 genomes]
rs2670642	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2670663	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2716942	0.81[AMR][1000 genomes]
rs4790787	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs55724398	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6502870	0.88[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
NLRP1	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)