SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10135342	0.95[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10873215	0.94[CEU][hapmap];0.83[TSI][hapmap]
rs11158755	0.93[CEU][hapmap]
rs17835218	0.83[CEU][hapmap];0.94[MEX][hapmap];0.96[TSI][hapmap];0.88[AMR][1000 genomes]
rs17835244	0.88[JPT][hapmap];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2877496	0.88[CEU][hapmap];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4899250	0.94[CEU][hapmap]
rs55767067	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7140554	0.83[CEU][hapmap]
rs7152224	0.83[CEU][hapmap]
rs8006890	0.88[CEU][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ZFP36L1	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 3)