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rVarBase
SNP Report
Basic Infomation
Name
rs1470003  
dbSNP
Location
chr:15,67469335
Allele
C/G
LD-proxy of rSNPs(r
2
>0.8) (count: 3)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11629568
1.00[CHD][hapmap]
rs17212752
1.00[CHD][hapmap]
rs956129
1.00[CHD][hapmap]
rSNP related genes
Symbol
Regulation type
SMAD3
Distal transcriptional regulation
ENSG00000259202
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 5)
eQTL related gene
Source
OPRS1
SCAN
MAP2K5
SCAN
FAM96A
SCAN
IQCH
SCAN
MAP2K5
SCAN