SNP Report

Basic Infomation

Name	rs13342031 dbSNP
Location	chr:17,40536871
Allele	C/G

LD-proxy of rSNPs(r²>0.8) (count: 57)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1026916	0.91[ASN][1000 genomes]
rs11079043	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12601611	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12602466	0.93[ASN][1000 genomes]
rs12937642	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12942547	0.91[ASN][1000 genomes]
rs12942611	0.86[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs12949918	0.90[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs12950549	0.81[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs17885629	0.90[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs17885741	0.81[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs17886724	0.84[ASN][1000 genomes]
rs1905340	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1905341	0.94[ASN][1000 genomes]
rs2306581	0.86[ASN][1000 genomes]
rs35314169	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35840966	0.91[ASN][1000 genomes]
rs35950888	0.80[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs3736162	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3736164	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3785898	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3816769	0.81[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs3869550	0.82[ASN][1000 genomes]
rs4103200	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4796647	0.90[ASN][1000 genomes]
rs4796791	0.90[ASN][1000 genomes]
rs4796793	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58288833	0.89[ASN][1000 genomes]
rs62075772	0.81[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs6503695	0.87[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs6503696	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6503697	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7211777	0.91[ASN][1000 genomes]
rs7214610	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7217655	0.83[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs7219059	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7219739	0.91[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs7224007	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7224416	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs744166	0.91[ASN][1000 genomes]
rs8068748	0.89[ASN][1000 genomes]
rs8069645	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8070763	0.84[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs8071537	0.91[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs8072391	0.83[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs8073517	0.86[ASN][1000 genomes]
rs8073836	0.89[ASN][1000 genomes]
rs8075676	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8076051	0.81[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs8081037	0.86[ASN][1000 genomes]
rs957970	0.91[ASN][1000 genomes]
rs957971	0.91[ASN][1000 genomes]
rs9891119	0.86[ASN][1000 genomes]
rs9895473	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9897389	0.91[ASN][1000 genomes]
rs9912773	0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9913597	0.89[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
STAT3	Distal transcriptional regulation
STAT3	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)