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rVarBase
SNP Report
Basic Infomation
Name
rs13219886  
dbSNP
Location
chr:6,21081952
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11967298
0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12200487
0.93[ASN][1000 genomes]
rs13210302
0.84[ASN][1000 genomes]
rs17834555
0.82[AFR][1000 genomes]
rs6904348
0.81[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs7762660
0.82[EUR][1000 genomes]
rs7762670
0.82[EUR][1000 genomes]
rs7762964
0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7768086
0.81[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
CDKAL1
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)