SNP Report

Basic Infomation

Name	rs13013436 dbSNP
Location	chr:2,102946632
Allele	G/T

LD-proxy of rSNPs(r²>0.8) (count: 26)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1054096	0.89[ASN][1000 genomes]
rs11465567	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs11465572	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes]
rs11465597	0.86[AFR][1000 genomes]
rs12987782	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12989197	0.89[ASN][1000 genomes]
rs12996097	0.89[ASN][1000 genomes]
rs12999517	1.00[ASN][1000 genomes]
rs12999542	0.89[ASN][1000 genomes]
rs13001301	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13005049	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13006323	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes]
rs13007174	0.89[ASN][1000 genomes]
rs13007819	0.89[ASN][1000 genomes]
rs13014044	0.89[ASN][1000 genomes]
rs13014644	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs13016771	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13016810	0.80[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs13022799	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13028993	0.89[ASN][1000 genomes]
rs17695648	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1946131	0.96[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs3755277	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3755278	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3771179	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4134504	0.82[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
IL1RL1	RNA binding protein mediated regulation
IL18R1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)