SNP Report
Basic Infomation
| Name | rs12937745 dbSNP |
|---|---|
| Location | chr:17,5423529 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 41)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11078568 | 1.00[JPT][hapmap] |
| rs11078569 | 1.00[JPT][hapmap] |
| rs11078570 | 1.00[JPT][hapmap] |
| rs11650171 | 1.00[JPT][hapmap] |
| rs11650176 | 1.00[JPT][hapmap] |
| rs11651816 | 1.00[JPT][hapmap] |
| rs11653450 | 1.00[JPT][hapmap] |
| rs11653496 | 1.00[JPT][hapmap] |
| rs11653580 | 1.00[JPT][hapmap] |
| rs11653757 | 1.00[AFR][1000 genomes] |
| rs11653832 | 1.00[JPT][hapmap] |
| rs11653957 | 1.00[JPT][hapmap] |
| rs11654130 | 1.00[JPT][hapmap] |
| rs11654272 | 1.00[JPT][hapmap] |
| rs11654410 | 1.00[JPT][hapmap] |
| rs11654528 | 1.00[JPT][hapmap] |
| rs11655423 | 1.00[JPT][hapmap] |
| rs11656036 | 1.00[JPT][hapmap] |
| rs11656183 | 1.00[JPT][hapmap] |
| rs11656724 | 1.00[JPT][hapmap] |
| rs11657249 | 1.00[JPT][hapmap] |
| rs11657416 | 1.00[JPT][hapmap] |
| rs11657747 | 1.00[JPT][hapmap] |
| rs12937100 | 1.00[JPT][hapmap] |
| rs12941416 | 1.00[JPT][hapmap] |
| rs12943068 | 1.00[JPT][hapmap] |
| rs12946897 | 1.00[JPT][hapmap] |
| rs12947593 | 1.00[JPT][hapmap] |
| rs12950902 | 1.00[JPT][hapmap] |
| rs12952208 | 1.00[CEU][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes] |
| rs12952718 | 1.00[JPT][hapmap] |
| rs35018100 | 0.89[EUR][1000 genomes] |
| rs36012620 | 0.93[EUR][1000 genomes] |
| rs71368553 | 1.00[ASN][1000 genomes] |
| rs7207641 | 1.00[JPT][hapmap] |
| rs7222565 | 1.00[JPT][hapmap] |
| rs7223362 | 1.00[JPT][hapmap] |
| rs7223514 | 1.00[JPT][hapmap] |
| rs7224071 | 1.00[JPT][hapmap] |
| rs8078947 | 1.00[JPT][hapmap] |
| rs8079834 | 1.00[JPT][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| NLRP1 | Proximal transcriptional regulation |
| NLRP1 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014