SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 7)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12436378	0.89[CEU][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1274761	0.81[CEU][hapmap];0.81[EUR][1000 genomes]
rs17756914	0.84[CEU][hapmap];0.83[EUR][1000 genomes]
rs34720143	0.81[EUR][1000 genomes]
rs56273152	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7147855	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs957258	0.84[CEU][hapmap];0.83[MEX][hapmap];0.81[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ZFP36L1	Distal transcriptional regulation
ENSG00000258623	Distal transcriptional regulation
ENSG00000242941	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 2)

eQTL related gene	Source
DISP2	SCAN
FUT8	SCAN