SNP Report

Basic Infomation

Name	rs12726330 dbSNP
Location	chr:1,155108167
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 5)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12742181	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs34195153	1.00[AMR][1000 genomes]
rs35682329	1.00[EUR][1000 genomes]
rs35749011	0.89[EUR][1000 genomes]
rs71628639	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
SLC50A1	Proximal transcriptional regulation
ENSG00000250784	Proximal transcriptional regulation
CHTF8	Distal transcriptional regulation
CIRH1A	Distal transcriptional regulation
ENSG00000188825	Distal transcriptional regulation
ENSG00000265692	Distal transcriptional regulation
ENSG00000212195	Distal transcriptional regulation
ENSG00000222724	Distal transcriptional regulation
TRPC4AP	Distal transcriptional regulation
EFHB	Distal transcriptional regulation
RAB5A	Distal transcriptional regulation
ENSG00000242622	Distal transcriptional regulation
HSP90AB1	Distal transcriptional regulation
ZKSCAN5	Distal transcriptional regulation
LSM5	Distal transcriptional regulation
AVL9	Distal transcriptional regulation
URGCP	Distal transcriptional regulation
UBE2D4	Distal transcriptional regulation
RPL12	Distal transcriptional regulation
LRSAM1	Distal transcriptional regulation
SNORA70	Distal transcriptional regulation
RCC1	Distal transcriptional regulation
NFYC	Distal transcriptional regulation
ELOVL1	Distal transcriptional regulation
BTF3L4	Distal transcriptional regulation
TXNDC12	Distal transcriptional regulation
STRIP1	Distal transcriptional regulation
EFNA3	Distal transcriptional regulation
MUC1	Distal transcriptional regulation
DPM3	Distal transcriptional regulation
KRTCAP2	Distal transcriptional regulation
TRIM46	Distal transcriptional regulation
ENSG00000231064	Distal transcriptional regulation
THBS3	Distal transcriptional regulation
GBAP1	Distal transcriptional regulation
CIRBP	Distal transcriptional regulation
PLEKHO1	Distal transcriptional regulation
ZBTB7B	Distal transcriptional regulation
ADAM15	Distal transcriptional regulation
EFNA4	Distal transcriptional regulation
ENSG00000251246	Distal transcriptional regulation
SHC1	Distal transcriptional regulation
FAM189B	Distal transcriptional regulation
SLC50A1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)