SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12722527	0.88[CEU][hapmap];0.92[CHB][hapmap];0.87[JPT][hapmap]
rs12722551	0.89[ASN][1000 genomes]
rs12722553	0.92[CHB][hapmap];0.86[JPT][hapmap];0.89[ASN][1000 genomes]
rs12722559	0.91[ASN][1000 genomes]
rs12722561	0.83[CEU][hapmap];0.92[CHB][hapmap];0.84[CHD][hapmap];0.93[JPT][hapmap];0.91[ASN][1000 genomes]
rs12722574	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12722587	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4625363	0.91[ASN][1000 genomes]
rs4747837	0.99[ASN][1000 genomes]
rs7093069	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7900385	1.00[ASN][1000 genomes]
rs7900744	0.89[CEU][hapmap];0.92[CHB][hapmap];0.93[JPT][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000251922	Proximal transcriptional regulation
IL2RA	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 1)