SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1232985	0.95[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs1232986	0.98[ASN][1000 genomes]
rs1233046	0.90[CHB][hapmap];0.89[JPT][hapmap]
rs1233047	0.95[CHB][hapmap];0.89[JPT][hapmap]
rs1233052	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs1233055	0.95[CHB][hapmap];0.89[JPT][hapmap]
rs2022526	0.95[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs2155794	0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2155795	0.95[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs2524317	0.90[CHB][hapmap];0.84[JPT][hapmap]
rs7959510	1.00[YRI][hapmap]
rs948392	0.94[CHB][hapmap];0.84[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
ENSG00000257905	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)