SNP Report
Basic Infomation
| Name | rs12314657 dbSNP |
|---|---|
| Location | chr:12,49798982 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 17)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11169002 | 1.00[LWK][hapmap] |
| rs12296566 | 1.00[AFR][1000 genomes] |
| rs12296820 | 1.00[AFR][1000 genomes] |
| rs12300629 | 1.00[AFR][1000 genomes] |
| rs12305194 | 1.00[AFR][1000 genomes] |
| rs12308020 | 1.00[AFR][1000 genomes] |
| rs12309060 | 1.00[AFR][1000 genomes] |
| rs12310740 | 1.00[LWK][hapmap] |
| rs12311831 | 1.00[AFR][1000 genomes] |
| rs12312499 | 1.00[AFR][1000 genomes] |
| rs12314311 | 1.00[AFR][1000 genomes] |
| rs12320434 | 1.00[CHD][hapmap] |
| rs12322207 | 1.00[LWK][hapmap] |
| rs12322364 | 1.00[AFR][1000 genomes] |
| rs12322383 | 1.00[AFR][1000 genomes] |
| rs12427232 | 1.00[LWK][hapmap] |
| rs28420769 | 1.00[AFR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| TUBA1C | Distal transcriptional regulation |
| SPATS2 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014