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rVarBase
SNP Report
Basic Infomation
Name
rs12310740  
dbSNP
Location
chr:12,49686288
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 5)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11169002
1.00[LWK][hapmap]
rs12314657
1.00[LWK][hapmap]
rs12321484
1.00[LWK][hapmap]
rs12322207
1.00[LWK][hapmap]
rs12427232
1.00[LWK][hapmap]
rSNP related genes
Symbol
Regulation type
PRPH
Proximal transcriptional regulation
ENSG00000258101
Distal transcriptional regulation
TUBA1C
Distal transcriptional regulation
ENSG00000258232
Distal transcriptional regulation
C1QL4
Distal transcriptional regulation
TROAP
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)