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rVarBase
SNP Report
Basic Infomation
Name
rs12077700  
dbSNP
Location
chr:1,1219775
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 3)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11260568
1.00[GIH][hapmap]
rs3753340
1.00[GIH][hapmap];0.83[YRI][hapmap]
rs6662635
0.89[YRI][hapmap]
rSNP related genes
Symbol
Regulation type
SCNN1D
Proximal transcriptional regulation
AGRN
Distal transcriptional regulation
UBE2J2
Distal transcriptional regulation
ENSG00000230415
Distal transcriptional regulation
SCNN1D
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)