SNP Report

Basic Infomation

Name	rs12021500 dbSNP
Location	chr:1,114066991
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 48)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11102630	0.81[EUR][1000 genomes]
rs11102636	0.88[ASN][1000 genomes]
rs11102637	0.88[ASN][1000 genomes]
rs11102638	0.88[ASN][1000 genomes]
rs11102639	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11102640	0.90[ASN][1000 genomes]
rs11102641	0.90[ASN][1000 genomes]
rs11102644	0.90[ASN][1000 genomes]
rs11102645	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs11102647	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12022213	0.86[ASN][1000 genomes]
rs12022849	0.95[ASN][1000 genomes]
rs12024139	0.96[ASN][1000 genomes]
rs12025806	0.88[ASN][1000 genomes]
rs12026682	0.99[ASN][1000 genomes]
rs12033666	0.90[ASN][1000 genomes]
rs12038473	0.90[ASN][1000 genomes]
rs12039226	0.90[ASN][1000 genomes]
rs12039669	0.85[ASN][1000 genomes]
rs12039944	0.86[ASN][1000 genomes]
rs12043827	0.88[ASN][1000 genomes]
rs12044485	0.90[ASN][1000 genomes]
rs12045148	0.93[ASN][1000 genomes]
rs12045559	0.89[ASN][1000 genomes]
rs12046434	0.80[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12046450	0.89[ASN][1000 genomes]
rs12046451	0.90[ASN][1000 genomes]
rs1573996	0.88[ASN][1000 genomes]
rs1936926	0.90[ASN][1000 genomes]
rs1936927	0.85[ASN][1000 genomes]
rs1936928	0.86[ASN][1000 genomes]
rs2051083	0.99[ASN][1000 genomes]
rs2359413	0.96[ASN][1000 genomes]
rs28661018	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2884705	0.95[ASN][1000 genomes]
rs4546922	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4838988	0.93[ASN][1000 genomes]
rs4839323	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4839324	0.80[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs72687938	0.89[ASN][1000 genomes]
rs72687939	0.90[ASN][1000 genomes]
rs72687944	0.90[ASN][1000 genomes]
rs72687947	0.90[ASN][1000 genomes]
rs72687948	0.90[ASN][1000 genomes]
rs72687949	0.90[ASN][1000 genomes]
rs72687960	0.97[ASN][1000 genomes]
rs72687961	0.96[ASN][1000 genomes]
rs7413018	0.86[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MAGI3	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)