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rVarBase
SNP Report
Basic Infomation
Name
rs11868567  
dbSNP
Location
chr:17,5363652
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 8)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11651071
0.85[EUR][1000 genomes]
rs11654266
1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11658701
1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11869157
0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16954727
1.00[CHB][hapmap]
rs1805468
0.88[CEU][hapmap]
rs3859291
0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8072203
0.83[CHD][hapmap]
rSNP related genes
Symbol
Regulation type
DHX33
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)