SNP Report
Basic Infomation
| Name | rs11856485 dbSNP |
|---|---|
| Location | chr:15,67507714 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 46)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1037039 | 0.90[ASN][1000 genomes] |
| rs1050285 | 0.96[ASN][1000 genomes] |
| rs11071945 | 0.86[ASN][1000 genomes] |
| rs11556090 | 0.89[ASN][1000 genomes] |
| rs11631135 | 0.90[ASN][1000 genomes] |
| rs11852260 | 0.80[ASN][1000 genomes] |
| rs11855544 | 0.99[ASN][1000 genomes] |
| rs11855736 | 0.83[ASN][1000 genomes] |
| rs11858541 | 0.96[ASN][1000 genomes] |
| rs12591763 | 0.87[ASN][1000 genomes] |
| rs12592388 | 0.90[ASN][1000 genomes] |
| rs13313480 | 0.90[ASN][1000 genomes] |
| rs13379644 | 0.90[ASN][1000 genomes] |
| rs1444934 | 0.86[ASN][1000 genomes] |
| rs16950870 | 0.86[AMR][1000 genomes] |
| rs1822829 | 0.93[ASN][1000 genomes] |
| rs1992216 | 0.90[ASN][1000 genomes] |
| rs2044330 | 0.90[ASN][1000 genomes] |
| rs4641686 | 0.82[ASN][1000 genomes] |
| rs55832357 | 0.81[ASN][1000 genomes] |
| rs55841220 | 0.90[ASN][1000 genomes] |
| rs55885982 | 0.89[ASN][1000 genomes] |
| rs55894213 | 0.88[ASN][1000 genomes] |
| rs58036323 | 0.81[ASN][1000 genomes] |
| rs62014612 | 0.92[ASN][1000 genomes] |
| rs6494636 | 0.86[ASN][1000 genomes] |
| rs6494638 | 0.85[ASN][1000 genomes] |
| rs7161888 | 0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs7165503 | 0.96[ASN][1000 genomes] |
| rs7167097 | 0.90[ASN][1000 genomes] |
| rs7170004 | 0.80[ASN][1000 genomes] |
| rs7171475 | 0.99[ASN][1000 genomes] |
| rs7172645 | 0.96[ASN][1000 genomes] |
| rs8024648 | 0.99[ASN][1000 genomes] |
| rs8027755 | 0.84[ASN][1000 genomes] |
| rs8027890 | 0.99[ASN][1000 genomes] |
| rs8029371 | 0.80[ASN][1000 genomes] |
| rs8032525 | 0.90[ASN][1000 genomes] |
| rs8032868 | 0.86[ASN][1000 genomes] |
| rs8032898 | 0.95[ASN][1000 genomes] |
| rs8038097 | 0.93[AMR][1000 genomes];0.92[ASN][1000 genomes] |
| rs8038739 | 0.90[ASN][1000 genomes] |
| rs8038883 | 0.86[ASN][1000 genomes] |
| rs8040514 | 0.90[ASN][1000 genomes] |
| rs8182047 | 0.95[ASN][1000 genomes] |
| rs956197 | 0.81[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| AAGAB | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014