SNP Report

Basic Infomation

Name	rs11632754 dbSNP
Location	chr:15,67480969
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 70)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10438290	0.95[CEU][hapmap];0.87[JPT][hapmap];0.83[AMR][1000 genomes]
rs1052488	0.95[CEU][hapmap];0.84[CHB][hapmap];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs10851773	0.86[AMR][1000 genomes]
rs11071943	0.95[CEU][hapmap];0.86[AMR][1000 genomes]
rs11071944	0.86[AMR][1000 genomes]
rs11071947	0.95[CEU][hapmap];0.88[JPT][hapmap];0.83[AMR][1000 genomes]
rs11636197	0.95[CEU][hapmap];0.94[JPT][hapmap];0.80[AMR][1000 genomes]
rs12438251	0.95[CEU][hapmap];0.86[AMR][1000 genomes]
rs12440869	0.95[CEU][hapmap];0.82[AMR][1000 genomes]
rs12441076	0.81[AMR][1000 genomes]
rs12441098	0.82[AMR][1000 genomes]
rs12594477	0.80[AMR][1000 genomes]
rs15974	0.95[CEU][hapmap];0.86[AMR][1000 genomes]
rs17230761	0.95[CEU][hapmap];0.80[AMR][1000 genomes]
rs17295739	0.85[AMR][1000 genomes]
rs17296465	0.82[AMR][1000 genomes]
rs1992217	0.81[AMR][1000 genomes]
rs2028762	0.95[CEU][hapmap];0.84[CHB][hapmap];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2044329	0.95[CEU][hapmap];0.94[JPT][hapmap];0.85[AMR][1000 genomes]
rs2120837	0.84[AMR][1000 genomes]
rs2289788	0.86[AMR][1000 genomes]
rs2414945	0.95[CEU][hapmap];0.86[AMR][1000 genomes]
rs28418884	0.86[AMR][1000 genomes]
rs28429363	0.82[AMR][1000 genomes]
rs28571147	0.80[AMR][1000 genomes]
rs28693872	0.86[AMR][1000 genomes]
rs3743343	0.95[CEU][hapmap];0.84[CHB][hapmap];0.86[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs4133922	0.83[AMR][1000 genomes]
rs4374116	0.95[CEU][hapmap];0.88[JPT][hapmap];0.83[AMR][1000 genomes]
rs4412926	0.84[AMR][1000 genomes]
rs4597266	0.84[AMR][1000 genomes]
rs4776354	0.95[CEU][hapmap]
rs4776918	0.95[CEU][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes]
rs4776919	0.95[CEU][hapmap];0.88[JPT][hapmap]
rs4776920	0.95[CEU][hapmap];0.82[AMR][1000 genomes]
rs4776921	0.84[AMR][1000 genomes]
rs4776923	0.95[CEU][hapmap]
rs6494639	0.95[CEU][hapmap];0.94[JPT][hapmap];0.90[AMR][1000 genomes]
rs6494640	0.95[CEU][hapmap];0.94[JPT][hapmap];0.89[AMR][1000 genomes]
rs67360912	0.82[AMR][1000 genomes]
rs7161879	0.95[CEU][hapmap];0.82[JPT][hapmap];0.85[AMR][1000 genomes]
rs7162340	0.80[AMR][1000 genomes]
rs7162810	0.80[AMR][1000 genomes]
rs7163460	0.95[CEU][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes]
rs7173826	0.82[JPT][hapmap]
rs7176337	0.95[CEU][hapmap];0.89[JPT][hapmap];0.87[AMR][1000 genomes]
rs7176940	0.95[CEU][hapmap];0.94[JPT][hapmap];0.90[AMR][1000 genomes]
rs7177772	0.95[CEU][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes]
rs7178975	0.95[CEU][hapmap];0.88[JPT][hapmap];0.82[AMR][1000 genomes]
rs7183186	0.95[CEU][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes]
rs8025186	0.95[CEU][hapmap];0.94[JPT][hapmap]
rs8025414	0.86[AMR][1000 genomes]
rs8028934	0.95[CEU][hapmap];0.82[JPT][hapmap]
rs8029582	0.95[CEU][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes]
rs8029963	0.95[CEU][hapmap];0.94[JPT][hapmap]
rs8030142	0.95[CEU][hapmap];0.94[JPT][hapmap]
rs8031586	0.93[JPT][hapmap];0.83[AMR][1000 genomes]
rs8032438	0.95[CEU][hapmap];0.82[AMR][1000 genomes]
rs8034421	0.95[CEU][hapmap];0.86[AMR][1000 genomes]
rs8035235	0.95[CEU][hapmap];0.88[JPT][hapmap];0.87[AMR][1000 genomes]
rs8038044	0.87[AMR][1000 genomes]
rs8038166	0.95[CEU][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes]
rs8042340	0.95[CEU][hapmap];0.90[AMR][1000 genomes]
rs8991	0.95[CEU][hapmap];0.86[AMR][1000 genomes]
rs971868	0.95[CEU][hapmap];0.84[AMR][1000 genomes]
rs975944	0.85[AMR][1000 genomes]
rs975946	0.95[CEU][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes]
rs9806386	0.95[CEU][hapmap];0.94[JPT][hapmap];0.85[AMR][1000 genomes]
rs9920845	0.89[AMR][1000 genomes]
rs9920957	0.95[CEU][hapmap];0.82[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000259347	Distal transcriptional regulation
SMAD3	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)