SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 8)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11574103	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11574114	0.80[EUR][1000 genomes]
rs11574119	1.00[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs11574139	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2853563	0.83[EUR][1000 genomes]
rs3858733	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs55748765	0.80[EUR][1000 genomes]
rs58789572	0.80[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
HDAC7	Distal transcriptional regulation
VDR	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)