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rVarBase
SNP Report
Basic Infomation
Name
rs11564269  
dbSNP
Location
chr:12,40698422
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10506153
1.00[CHD][hapmap]
rs10878246
1.00[CHD][hapmap]
rs11564113
1.00[AMR][1000 genomes]
rs11564177
1.00[CHD][hapmap]
rs11564181
1.00[AMR][1000 genomes]
rs11564205
1.00[CHD][hapmap]
rs11829088
1.00[CHD][hapmap]
rs17444068
0.85[AMR][1000 genomes]
rs2708405
1.00[CHD][hapmap]
rSNP related genes
Symbol
Regulation type
LRRK2
Proximal transcriptional regulation
LRRK2
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)