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rVarBase
SNP Report
Basic Infomation
Name
rs11548537  
dbSNP
Location
chr:11,65305758
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 10)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11385
1.00[CHD][hapmap]
rs11545201
1.00[CHD][hapmap]
rs11545202
1.00[CHD][hapmap];1.00[LWK][hapmap]
rs11568302
1.00[MEX][hapmap]
rs12225168
1.00[LWK][hapmap]
rs12271652
1.00[CHD][hapmap]
rs3015963
1.00[CEU][hapmap];1.00[CHD][hapmap]
rs3741379
1.00[LWK][hapmap]
rs7931052
1.00[LWK][hapmap];1.00[MEX][hapmap]
rs7931269
1.00[LWK][hapmap]
rSNP related genes
Symbol
Regulation type
NEAT1
Distal transcriptional regulation
SCYL1
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)