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rVarBase
SNP Report
Basic Infomation
Name
rs11488701  
dbSNP
Location
chr:1,1270453
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 10)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs12409587
0.95[ASN][1000 genomes]
rs1886773
0.83[AFR][1000 genomes]
rs307346
0.81[AFR][1000 genomes]
rs307354
0.87[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs307368
0.81[AMR][1000 genomes]
rs35424002
0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs3813210
1.00[ASN][1000 genomes]
rs3813211
0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4970440
0.94[EUR][1000 genomes]
rs62623580
0.80[AMR][1000 genomes];0.95[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
TAS1R3
Proximal transcriptional regulation
TAS1R3
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)