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rVarBase
SNP Report
Basic Infomation
Name
rs11260535  
dbSNP
Location
chr:1,1107842
Allele
G/C
LD-proxy of rSNPs(r
2
>0.8) (count: 6)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11260537
0.83[EUR][1000 genomes]
rs11260543
0.81[EUR][1000 genomes]
rs11260544
0.81[EUR][1000 genomes]
rs12096422
0.81[EUR][1000 genomes]
rs5010604
0.83[EUR][1000 genomes]
rs74045197
0.81[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
TTLL10
Proximal transcriptional regulation
C1orf159
Distal transcriptional regulation
MIR200B
Distal transcriptional regulation
MIR200A
Distal transcriptional regulation
TTLL10-AS1
Distal transcriptional regulation
TTLL10
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)