SNP Report

Basic Infomation

Name	rs11186914 dbSNP
Location	chr:10,94062631
Allele	T/A

LD-proxy of rSNPs(r²>0.8) (count: 44)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10748577	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10748578	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10748579	1.00[ASW][hapmap];0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10786029	0.90[CHB][hapmap];0.91[JPT][hapmap]
rs10786031	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10786033	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10786037	0.96[CEU][hapmap]
rs10882028	0.88[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs10882042	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11186915	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1971471	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2245994	0.86[ASN][1000 genomes]
rs2253904	0.95[ASN][1000 genomes]
rs2254667	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2255718	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2265195	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2488793	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2771248	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2771253	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2771256	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2771265	0.95[ASN][1000 genomes]
rs2798254	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3781229	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3824734	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4933227	0.88[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes]
rs4933228	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4933229	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4933720	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4999831	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs701846	0.88[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs7078559	0.89[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs7087501	0.85[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs7090737	0.91[CHB][hapmap];1.00[JPT][hapmap]
rs7091853	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7094433	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7908721	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7914436	0.85[ASN][1000 genomes]
rs7920520	0.91[CHB][hapmap];1.00[JPT][hapmap]
rs855699	0.89[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs855702	0.89[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs855704	0.89[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs855707	0.89[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs913649	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9943333	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MARCH5	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)