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rVarBase
SNP Report
Basic Infomation
Name
rs11173764  
dbSNP
Location
chr:12,40221482
Allele
C/A
LD-proxy of rSNPs(r
2
>0.8) (count: 7)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11173668
1.00[ASN][1000 genomes]
rs11173671
1.00[ASN][1000 genomes]
rs11173862
1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11173920
1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11174086
1.00[ASN][1000 genomes]
rs4296099
0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4542485
0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
C12orf40
RNA binding protein mediated regulation
SLC2A13
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)