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rVarBase
SNP Report
Basic Infomation
Name
rs11145937  
dbSNP
Location
chr:9,139254805
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 6)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10870125
0.85[AMR][1000 genomes]
rs12001608
1.00[YRI][hapmap]
rs3812552
1.00[CEU][hapmap];0.82[CHB][hapmap];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs3812554
0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3829108
0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs45592338
0.82[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
DNLZ
Proximal transcriptional regulation
DNLZ
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)