SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10896016	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11227221	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1151517	0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11601767	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11604423	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11607147	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12790095	0.85[EUR][1000 genomes]
rs3782091	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4244811	0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
LTBP3	Proximal transcriptional regulation
MALAT1	Distal transcriptional regulation
ENSG00000270117	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)