SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10920106	0.93[CHB][hapmap]
rs11811602	0.94[CHB][hapmap];0.92[ASN][1000 genomes]
rs12026017	0.89[ASN][1000 genomes]
rs2296386	1.00[CHB][hapmap];0.94[JPT][hapmap];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3767506	0.88[CHB][hapmap]
rs3767507	0.88[CHB][hapmap]
rs3820422	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4915477	0.93[CHB][hapmap];1.00[YRI][hapmap];0.91[ASN][1000 genomes]
rs6667959	0.86[CHB][hapmap]
rs734879	0.86[CHB][hapmap]
rs7539618	0.86[CHB][hapmap]
rs942705	0.81[CHB][hapmap]
rs942706	0.81[CHB][hapmap]

rSNP related genes

Symbol	Regulation type
CACNA1S	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)