SNP Report

Basic Infomation

Name	rs10895986 dbSNP
Location	chr:11,64902002
Allele	C/A

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11227131	0.96[ASN][1000 genomes]
rs11227137	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17743381	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs3802936	0.81[ASN][1000 genomes]
rs3825073	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55646096	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6591177	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7124215	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7128220	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72932851	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9971546	0.81[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
SYVN1	Proximal transcriptional regulation
CROCCP2	Distal transcriptional regulation
ENSG00000201699	Distal transcriptional regulation
ATXN2L	Distal transcriptional regulation
RAB40C	Distal transcriptional regulation
MPHOSPH6	Distal transcriptional regulation
ENSG00000261029	Distal transcriptional regulation
SDF2	Distal transcriptional regulation
SUPT6H	Distal transcriptional regulation
EIF4A1	Distal transcriptional regulation
ENSG00000264772	Distal transcriptional regulation
BRCA1	Distal transcriptional regulation
NBR2	Distal transcriptional regulation
DDX5	Distal transcriptional regulation
CEP95	Distal transcriptional regulation
C19orf24	Distal transcriptional regulation
RPL31	Distal transcriptional regulation
ENSG00000223947	Distal transcriptional regulation
RBM39	Distal transcriptional regulation
KPNA1	Distal transcriptional regulation
SUMF2	Distal transcriptional regulation
SH3GLB2	Distal transcriptional regulation
RPL10	Distal transcriptional regulation
ZDHHC5	Distal transcriptional regulation
EHD1	Distal transcriptional regulation
ATG2A	Distal transcriptional regulation
PPP2R5B	Distal transcriptional regulation
SNX15	Distal transcriptional regulation
SPDYC	Distal transcriptional regulation
ENSG00000255200	Distal transcriptional regulation
PGAM1P8	Distal transcriptional regulation
CAPN1	Distal transcriptional regulation
ENSG00000222477	Distal transcriptional regulation
ENSG00000254614	Distal transcriptional regulation
ENSG00000255058	Distal transcriptional regulation
POLA2	Distal transcriptional regulation
VPS51	Distal transcriptional regulation
MEX3B	Distal transcriptional regulation
SF1	Distal transcriptional regulation
ENSG00000269038	Distal transcriptional regulation
NEAT1	Distal transcriptional regulation
HIGD1AP10	Distal transcriptional regulation
MESDC1	Distal transcriptional regulation
ENSG00000263770	Distal transcriptional regulation
CDC42BPG	Distal transcriptional regulation
BATF2	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)