SNP Report

Basic Infomation

Name	rs10878113 dbSNP
Location	chr:12,40526498
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 43)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1031996	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10784370	0.81[EUR][1000 genomes]
rs10784381	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10784386	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11175275	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11175326	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11175327	0.87[ASN][1000 genomes]
rs12230710	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1388590	0.86[ASN][1000 genomes]
rs1388591	0.81[ASN][1000 genomes]
rs1463719	0.86[ASN][1000 genomes]
rs1472118	0.81[EUR][1000 genomes]
rs1491931	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1844921	0.80[ASN][1000 genomes]
rs2131082	0.83[ASN][1000 genomes]
rs2131083	0.83[ASN][1000 genomes]
rs2170503	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2404573	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2638245	0.80[ASN][1000 genomes]
rs2638254	0.82[ASN][1000 genomes]
rs2638260	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2638262	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2638263	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2638264	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2638266	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2638267	0.81[ASN][1000 genomes]
rs2708449	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2708470	0.83[ASN][1000 genomes]
rs2708472	0.83[ASN][1000 genomes]
rs2708473	0.83[ASN][1000 genomes]
rs2708476	0.81[ASN][1000 genomes]
rs2708480	0.82[ASN][1000 genomes]
rs2708494	0.80[ASN][1000 genomes]
rs3812791	0.83[EUR][1000 genomes]
rs7132203	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs716231	0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs722817	0.81[ASN][1000 genomes]
rs7306140	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs878010	0.83[EUR][1000 genomes]
rs900253	0.83[EUR][1000 genomes]
rs937109	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs937110	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs937111	0.83[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
LRRK2	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)