SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 18)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10882029	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap]
rs10882034	0.82[CHB][hapmap];0.95[JPT][hapmap];0.84[YRI][hapmap]
rs10882039	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.82[AMR][1000 genomes]
rs11186848	0.83[CHB][hapmap];0.95[JPT][hapmap];0.85[YRI][hapmap]
rs11186851	0.82[CHB][hapmap];0.95[JPT][hapmap]
rs11186869	0.82[AMR][1000 genomes]
rs11186872	0.82[CHB][hapmap];0.95[JPT][hapmap];0.84[YRI][hapmap]
rs12256461	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12412346	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3740302	0.82[AMR][1000 genomes]
rs4933721	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7085368	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7089099	0.82[AFR][1000 genomes]
rs7098170	0.82[CHB][hapmap];0.95[JPT][hapmap]
rs730075	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7917088	0.82[CHB][hapmap];0.95[JPT][hapmap]
rs932820	0.82[CHB][hapmap];0.95[JPT][hapmap]
rs9804247	0.82[CHB][hapmap];0.95[JPT][hapmap];0.84[YRI][hapmap]

rSNP related genes

Symbol	Regulation type
MARCH5	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)