SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 19)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10735662	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10781542	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10870065	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10870071	0.83[EUR][1000 genomes]
rs10870194	0.80[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11145756	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11145760	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1127152	0.83[EUR][1000 genomes]
rs1128874	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs35763810	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs36066734	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4378078	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4379550	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6560632	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs68002978	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7851507	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7863766	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7874956	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs8413	0.90[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
INPP5E	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 1)