SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 22)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10415088	0.90[EUR][1000 genomes]
rs10416143	0.90[EUR][1000 genomes]
rs11666164	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11670508	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11670704	0.90[EUR][1000 genomes]
rs11672021	0.91[EUR][1000 genomes]
rs12974442	0.83[EUR][1000 genomes]
rs12983921	0.90[EUR][1000 genomes]
rs35084366	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35452057	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs58172634	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs60167376	0.95[EUR][1000 genomes]
rs62130736	0.95[EUR][1000 genomes]
rs62131889	0.80[EUR][1000 genomes]
rs7246953	0.83[MEX][hapmap]
rs7247481	0.96[EUR][1000 genomes]
rs7259088	0.91[EUR][1000 genomes]
rs7259116	0.85[EUR][1000 genomes]
rs7259385	0.92[EUR][1000 genomes]
rs7343087	0.83[EUR][1000 genomes]
rs74179925	0.83[EUR][1000 genomes]
rs74179926	0.99[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
PDE4A	Proximal transcriptional regulation
PDE4A	Distal transcriptional regulation
PDE4A	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 1)