SNP Report
Name | rs10495903   dbSNP |
---|---|
Location | chr:2,43806918 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10168889 | 0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10186307 | 0.88[CEU][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10186441 | 0.88[CEU][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10189235 | 0.86[GIH][hapmap] |
rs10203174 | 0.86[GIH][hapmap] |
rs11886047 | 0.86[ASN][1000 genomes] |
rs11889544 | 1.00[CEU][hapmap];1.00[ASN][1000 genomes] |
rs11889803 | 0.88[CEU][hapmap];0.80[EUR][1000 genomes] |
rs11901680 | 0.88[CEU][hapmap];1.00[ASN][1000 genomes] |
rs11904361 | 0.88[CEU][hapmap];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12463527 | 0.88[CEU][hapmap];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12466060 | 0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12467151 | 0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12467420 | 0.88[CEU][hapmap];1.00[TSI][hapmap];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12469373 | 0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12469695 | 0.88[CEU][hapmap];1.00[TSI][hapmap];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12469959 | 0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12471686 | 0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12471904 | 0.88[CEU][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12473987 | 0.88[CEU][hapmap];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12474030 | 0.88[CEU][hapmap];0.96[GIH][hapmap];0.86[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12474102 | 0.88[CEU][hapmap];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12475503 | 0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12478337 | 0.87[EUR][1000 genomes] |
rs13404811 | 0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs13414140 | 0.86[GIH][hapmap] |
rs17030798 | 0.93[GIH][hapmap] |
rs17030835 | 0.90[GIH][hapmap] |
rs17030967 | 0.86[GIH][hapmap] |
rs17030980 | 0.86[GIH][hapmap] |
rs17030998 | 0.86[GIH][hapmap] |
rs17031005 | 0.86[GIH][hapmap] |
rs17031016 | 0.86[GIH][hapmap] |
rs17031079 | 0.88[CEU][hapmap];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17031088 | 0.87[CEU][hapmap];1.00[GIH][hapmap];0.86[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17031092 | 0.88[CEU][hapmap];1.00[GIH][hapmap];0.86[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17031095 | 0.88[CEU][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs17031106 | 0.88[CEU][hapmap];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs17031116 | 0.88[CEU][hapmap];0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs35478206 | 0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs4339008 | 0.88[CEU][hapmap];0.93[TSI][hapmap];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs55640722 | 0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs55855805 | 0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs55921927 | 0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs57066469 | 0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs60735069 | 0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs60868396 | 0.92[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs60955978 | 0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs61271889 | 0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs61754256 | 0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6544675 | 0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6705351 | 0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6712944 | 0.85[CEU][hapmap];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6715003 | 0.88[CEU][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6717791 | 0.88[CEU][hapmap];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6725688 | 0.88[CEU][hapmap];0.93[TSI][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6726404 | 0.88[CEU][hapmap];0.85[MEX][hapmap];0.93[TSI][hapmap];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6731636 | 0.88[CEU][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6746058 | 0.93[GIH][hapmap] |
rs6749617 | 0.93[TSI][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6751161 | 0.86[GIH][hapmap] |
rs6753942 | 0.86[GIH][hapmap] |
rs6759383 | 0.88[CEU][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6759861 | 0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6760391 | 0.89[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs72868625 | 0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs72868628 | 0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs72868636 | 0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73925552 | 0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73925553 | 0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73925554 | 0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7556744 | 0.89[GIH][hapmap] |
rs7559670 | 0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs7559723 | 0.88[CEU][hapmap];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs7561287 | 0.93[GIH][hapmap] |
rs7568901 | 0.88[CEU][hapmap];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7575024 | 0.93[GIH][hapmap] |
rs7576643 | 0.88[CEU][hapmap];0.93[TSI][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7578597 | 0.83[GIH][hapmap] |
rs7586101 | 0.93[GIH][hapmap] |
rs7599781 | 0.93[GIH][hapmap] |
rs7601039 | 0.87[EUR][1000 genomes] |
rs7602701 | 0.88[CEU][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
THADA | Proximal transcriptional regulation |
THADA | Distal transcriptional regulation |
THADA | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014