SNP Report
Name | rs10168889   dbSNP |
---|---|
Location | chr:2,43841717 |
Allele | A/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10186307 | 0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10186441 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10495903 | 0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11886047 | 0.86[ASN][1000 genomes] |
rs11889544 | 0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11889803 | 0.90[EUR][1000 genomes] |
rs11901680 | 0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11904361 | 0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12463527 | 0.95[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12466060 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12467151 | 0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12467420 | 0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12469373 | 0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12469695 | 0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12469959 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12471686 | 0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12471904 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12473987 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12474030 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12474102 | 0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12475503 | 0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12478337 | 0.89[EUR][1000 genomes] |
rs13404811 | 0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17031079 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17031088 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17031092 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17031095 | 0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs17031106 | 0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs17031116 | 0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs35478206 | 0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs4339008 | 0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs55640722 | 0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs55855805 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs55921927 | 0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs57066469 | 0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs60735069 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs60868396 | 0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs60955978 | 0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs61271889 | 0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs61754256 | 0.93[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6544675 | 0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6705351 | 0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6712944 | 0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6715003 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6717791 | 0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6725688 | 0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6726404 | 0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6731636 | 0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6749617 | 0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6759383 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6759861 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6760391 | 0.84[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs72868625 | 0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs72868628 | 0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs72868636 | 0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73925552 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73925553 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73925554 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7559670 | 0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs7559723 | 0.96[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs7568901 | 0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7576643 | 0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7601039 | 0.83[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs7602701 | 0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000207411 | Distal transcriptional regulation |
Proximal transcriptional regulation

Distal transcriptional regulation

Distal block | Cell Line | Cell type | Cell Stage | Data source |
---|---|---|---|---|
chr2:43839149..43841796-chr2:43848003..43850752,3 | K562 | blood:Leukemia cell | wgEncodeGisChiaPet |
Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014