SNP Report
Basic Infomation
| Name | rs10463196 dbSNP |
|---|---|
| Location | chr:5,96247750 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 70)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1019503 | 0.82[ASN][1000 genomes] |
| rs1056893 | 0.82[ASN][1000 genomes] |
| rs1216565 | 0.81[ASN][1000 genomes] |
| rs1216569 | 0.81[ASN][1000 genomes] |
| rs1230381 | 0.82[ASN][1000 genomes] |
| rs1230382 | 0.82[ASN][1000 genomes] |
| rs1363975 | 0.82[ASN][1000 genomes] |
| rs1363977 | 0.82[ASN][1000 genomes] |
| rs1423568 | 0.82[ASN][1000 genomes] |
| rs17087165 | 0.82[ASN][1000 genomes] |
| rs171647 | 0.82[ASN][1000 genomes] |
| rs187265 | 0.82[ASN][1000 genomes] |
| rs193993 | 0.81[ASN][1000 genomes] |
| rs1981846 | 0.81[ASN][1000 genomes] |
| rs2042383 | 0.81[ASN][1000 genomes] |
| rs2042385 | 0.82[ASN][1000 genomes] |
| rs2113189 | 0.81[ASN][1000 genomes] |
| rs2113190 | 0.82[ASN][1000 genomes] |
| rs2113191 | 0.82[ASN][1000 genomes] |
| rs2161658 | 0.82[ASN][1000 genomes] |
| rs2248374 | 0.82[ASN][1000 genomes] |
| rs2255546 | 0.82[ASN][1000 genomes] |
| rs2255633 | 0.82[ASN][1000 genomes] |
| rs2255634 | 0.82[ASN][1000 genomes] |
| rs2255637 | 0.82[ASN][1000 genomes] |
| rs2287988 | 0.82[ASN][1000 genomes] |
| rs251342 | 0.82[ASN][1000 genomes] |
| rs2548520 | 0.81[ASN][1000 genomes] |
| rs2548522 | 0.82[ASN][1000 genomes] |
| rs2548523 | 0.82[ASN][1000 genomes] |
| rs2548524 | 0.82[ASN][1000 genomes] |
| rs2548525 | 0.82[ASN][1000 genomes] |
| rs2548526 | 0.82[ASN][1000 genomes] |
| rs2548527 | 0.82[ASN][1000 genomes] |
| rs2548528 | 0.82[ASN][1000 genomes] |
| rs2548529 | 0.82[ASN][1000 genomes] |
| rs2548533 | 0.82[ASN][1000 genomes] |
| rs2548534 | 0.81[ASN][1000 genomes] |
| rs2548535 | 0.81[ASN][1000 genomes] |
| rs2548536 | 0.81[ASN][1000 genomes] |
| rs2548537 | 0.81[ASN][1000 genomes] |
| rs2548538 | 0.81[ASN][1000 genomes] |
| rs2548539 | 0.81[ASN][1000 genomes] |
| rs2548540 | 0.81[ASN][1000 genomes] |
| rs2549781 | 0.81[ASN][1000 genomes] |
| rs2549782 | 0.81[ASN][1000 genomes] |
| rs2549784 | 0.81[ASN][1000 genomes] |
| rs2549785 | 0.81[ASN][1000 genomes] |
| rs2549786 | 0.83[ASN][1000 genomes] |
| rs2549787 | 0.82[ASN][1000 genomes] |
| rs2549788 | 0.82[ASN][1000 genomes] |
| rs2549789 | 0.82[ASN][1000 genomes] |
| rs2549790 | 0.82[ASN][1000 genomes] |
| rs2549791 | 0.82[ASN][1000 genomes] |
| rs2549792 | 0.81[ASN][1000 genomes] |
| rs2549795 | 0.82[ASN][1000 genomes] |
| rs2549796 | 0.82[ASN][1000 genomes] |
| rs2549797 | 0.82[ASN][1000 genomes] |
| rs2549798 | 0.83[ASN][1000 genomes] |
| rs2549799 | 0.83[ASN][1000 genomes] |
| rs2549800 | 0.82[ASN][1000 genomes] |
| rs2549801 | 0.82[ASN][1000 genomes] |
| rs2910686 | 0.80[ASN][1000 genomes] |
| rs2910688 | 0.80[ASN][1000 genomes] |
| rs3096167 | 0.81[ASN][1000 genomes] |
| rs3096168 | 0.83[ASN][1000 genomes] |
| rs33934033 | 0.82[ASN][1000 genomes] |
| rs3849750 | 0.81[ASN][1000 genomes] |
| rs6556943 | 0.81[ASN][1000 genomes] |
| rs6874656 | 0.81[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ERAP2 | Proximal transcriptional regulation |
| ENSG00000247121 | RNA binding protein mediated regulation |
| ERAP2 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014