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rVarBase
SNP Report
Basic Infomation
Name
rs10197515  
dbSNP
Location
chr:2,65665462
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 10)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs13391635
0.97[AFR][1000 genomes]
rs13396987
0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13397025
1.00[AMR][1000 genomes]
rs13397223
0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13411612
1.00[AMR][1000 genomes]
rs13413791
0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13422208
0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56192453
1.00[AMR][1000 genomes]
rs56297108
1.00[AMR][1000 genomes]
rs6712418
1.00[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
ACTR2
Distal transcriptional regulation
SPRED2
Distal transcriptional regulation
ENSG00000232693
Distal transcriptional regulation
PPP3R1
Distal transcriptional regulation
ENSG00000223739
Distal transcriptional regulation
ENSG00000234255
Distal transcriptional regulation
ENSG00000204929
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)