SNP Report

Basic Infomation

Name	rs10152595 dbSNP
Location	chr:15,67475488
Allele	C/G

LD-proxy of rSNPs(r²>0.8) (count: 60)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10152593	0.82[ASN][1000 genomes]
rs10438355	0.85[AMR][1000 genomes]
rs10518716	0.81[AMR][1000 genomes]
rs11071940	0.81[AMR][1000 genomes]
rs12148121	0.82[AMR][1000 genomes]
rs12148134	0.81[AMR][1000 genomes]
rs12443279	0.81[AMR][1000 genomes]
rs12476	0.81[AMR][1000 genomes]
rs12592400	0.81[AMR][1000 genomes]
rs12594065	0.82[AMR][1000 genomes]
rs12594229	0.80[AMR][1000 genomes]
rs12594234	0.80[AMR][1000 genomes]
rs12595334	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12898685	0.83[AMR][1000 genomes]
rs12899051	0.81[AMR][1000 genomes]
rs12899067	0.83[AMR][1000 genomes]
rs12900708	0.85[AMR][1000 genomes]
rs12901312	0.80[AMR][1000 genomes]
rs12901789	0.80[AMR][1000 genomes]
rs12910062	0.82[AMR][1000 genomes]
rs12910196	0.83[AMR][1000 genomes]
rs12916403	0.80[AMR][1000 genomes]
rs12917612	0.81[AMR][1000 genomes]
rs16950776	0.81[AMR][1000 genomes]
rs16950804	0.81[AMR][1000 genomes]
rs16950805	0.81[AMR][1000 genomes]
rs16953610	0.81[AMR][1000 genomes]
rs2278670	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2289262	0.81[AMR][1000 genomes]
rs2289790	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2289791	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs34296414	0.83[AMR][1000 genomes]
rs34590589	0.83[AMR][1000 genomes]
rs34699563	0.83[AMR][1000 genomes]
rs34796890	0.81[AMR][1000 genomes]
rs35129260	0.80[AMR][1000 genomes]
rs35151633	0.80[AMR][1000 genomes]
rs35997299	0.81[AMR][1000 genomes]
rs3743342	0.83[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs3825977	0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs4432221	0.80[AMR][1000 genomes]
rs4776348	0.82[AMR][1000 genomes]
rs4776350	0.81[AMR][1000 genomes]
rs4776905	0.81[AMR][1000 genomes]
rs4776906	0.83[AMR][1000 genomes]
rs4776909	0.81[AMR][1000 genomes]
rs58074225	0.81[AMR][1000 genomes]
rs67486165	0.81[AMR][1000 genomes]
rs67872952	0.80[AMR][1000 genomes]
rs7178824	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7181543	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7181556	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7181877	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72625778	0.80[AMR][1000 genomes]
rs8025621	0.80[AMR][1000 genomes]
rs8025774	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs8031440	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs8031627	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs877177	0.81[AMR][1000 genomes]
rs9806590	0.83[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
SMAD3	Proximal transcriptional regulation
SMAD3	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)